Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rrp1P56183 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.56□□□□□ -0.4
Rrp1P56183 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rrp1P56183 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Gm8111-201ENSMUST00000117659 987 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.55□□□□□ -0.4
Rrp1P56183 Gm15595-201ENSMUST00000120840 961 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.55□□□□□ -0.4
Rrp1P56183 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.55□□□□□ -0.4
Rrp1P56183 Gm24844-201ENSMUST00000158679 127 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.55□□□□□ -0.4
Rrp1P56183 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.55□□□□□ -0.4
Rrp1P56183 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rrp1P56183 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rrp1P56183 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rrp1P56183 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rrp1P56183 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.55□□□□□ -0.4
Rrp1P56183 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm15515-201ENSMUST00000117827 822 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Gm11941-201ENSMUST00000119904 610 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm25226-201ENSMUST00000158198 123 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Gm19246-201ENSMUST00000173599 255 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm7741-201ENSMUST00000181445 989 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.54□□□□□ -0.4
Rrp1P56183 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.54□□□□□ -0.4
Rrp1P56183 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rrp1P56183 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.54□□□□□ -0.4
Rrp1P56183 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rrp1P56183 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rrp1P56183 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rrp1P56183 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms