Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Srp9P49962 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.48□□□□□ -0.89
Srp9P49962 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Srp9P49962 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Srp9P49962 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.47□□□□□ -0.89
Srp9P49962 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm14724-201ENSMUST00000118400 537 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Gm15808-201ENSMUST00000119046 604 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Gm14277-201ENSMUST00000121195 360 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.47□□□□□ -0.89
Srp9P49962 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Gm25881-201ENSMUST00000157783 103 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Mir8093-201ENSMUST00000185043 137 ntBASIC9.47□□□□□ -0.89
Srp9P49962 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm10288-201ENSMUST00000084614 537 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.47□□□□□ -0.89
Srp9P49962 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Srp9P49962 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Srp9P49962 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.47□□□□□ -0.89
Srp9P49962 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Srp9P49962 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Srp9P49962 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Srp9P49962 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Srp9P49962 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
Srp9P49962 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Srp9P49962 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Srp9P49962 Gm11500-201ENSMUST00000118237 601 ntBASIC9.46□□□□□ -0.9
Srp9P49962 Gm12501-201ENSMUST00000119163 529 ntBASIC9.46□□□□□ -0.9
Srp9P49962 Gm11783-201ENSMUST00000119549 885 ntBASIC9.46□□□□□ -0.9
Srp9P49962 Gm8566-201ENSMUST00000120174 465 ntBASIC9.46□□□□□ -0.9
Srp9P49962 Gm12266-201ENSMUST00000120311 962 ntBASIC9.46□□□□□ -0.9
Srp9P49962 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms