Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm22846-201ENSMUST00000157706 270 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm44445-201ENSMUST00000204075 2683 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.68□□□□□ -0.22
Nkx1-2P42580 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx1-2P42580 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm11573-201ENSMUST00000119956 394 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm11244-201ENSMUST00000121243 237 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm38321-201ENSMUST00000195053 235 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm6905-201ENSMUST00000205729 511 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm44103-201ENSMUST00000204364 3662 ntBASIC13.67□□□□□ -0.22
Nkx1-2P42580 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.67□□□□□ -0.22
Nkx1-2P42580 AC108416.1-201ENSMUST00000228755 1558 ntBASIC13.66□□□□□ -0.22
Nkx1-2P42580 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkx1-2P42580 Gm8111-201ENSMUST00000117659 987 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms