Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pbx1P41778 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.97□□□□□ -0.49
Pbx1P41778 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pbx1P41778 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.97□□□□□ -0.49
Pbx1P41778 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pbx1P41778 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pbx1P41778 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.97□□□□□ -0.49
Pbx1P41778 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pbx1P41778 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pbx1P41778 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Pbx1P41778 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pbx1P41778 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.96□□□□□ -0.49
Pbx1P41778 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Gm23251-201ENSMUST00000103773 110 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Gm15615-201ENSMUST00000118876 198 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Gm11836-201ENSMUST00000121022 441 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Gm14017-201ENSMUST00000121934 386 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.96□□□□□ -0.49
Pbx1P41778 Mir7051-201ENSMUST00000184167 73 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Gm37981-201ENSMUST00000194280 535 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.96□□□□□ -0.49
Pbx1P41778 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pbx1P41778 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.96□□□□□ -0.5
Pbx1P41778 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.96□□□□□ -0.5
Pbx1P41778 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Pbx1P41778 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.96□□□□□ -0.5
Pbx1P41778 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pbx1P41778 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.95□□□□□ -0.5
Pbx1P41778 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.95□□□□□ -0.5
Pbx1P41778 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm7666-201ENSMUST00000146631 819 ntBASIC11.95□□□□□ -0.5
Pbx1P41778 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm37246-201ENSMUST00000192665 835 ntBASIC11.95□□□□□ -0.5
Pbx1P41778 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pbx1P41778 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.95□□□□□ -0.5
Pbx1P41778 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pbx1P41778 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.95□□□□□ -0.5
Pbx1P41778 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pbx1P41778 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pbx1P41778 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pbx1P41778 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pbx1P41778 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms