Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm13392-201ENSMUST00000117708 150 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm8100-201ENSMUST00000182906 988 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm42859-201ENSMUST00000199572 193 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm44967-201ENSMUST00000207047 631 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.16□□□□□ -0.78
Hmgn1P18608 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Hmgn1P18608 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hmgn1P18608 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hmgn1P18608 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm24255-201ENSMUST00000104481 128 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm15711-201ENSMUST00000118889 535 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm12380-201ENSMUST00000119012 544 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm12196-201ENSMUST00000120954 262 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm15329-201ENSMUST00000121408 155 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm15549-201ENSMUST00000121595 622 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm14381-201ENSMUST00000122105 414 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm20482-202ENSMUST00000174729 825 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm7985-201ENSMUST00000183329 981 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm28032-201ENSMUST00000184104 96 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
Hmgn1P18608 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Nln-205ENSMUST00000224945 2486 ntBASIC10.15□□□□□ -0.78
Hmgn1P18608 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hmgn1P18608 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hmgn1P18608 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmgn1P18608 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.15□□□□□ -0.79
Hmgn1P18608 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hmgn1P18608 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Hmgn1P18608 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.15□□□□□ -0.79
Hmgn1P18608 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.14□□□□□ -0.79
Hmgn1P18608 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Hmgn1P18608 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hmgn1P18608 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms