Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.48□□□□□ -0.57
CopeO89079 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CopeO89079 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CopeO89079 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CopeO89079 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CopeO89079 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.47□□□□□ -0.57
CopeO89079 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.47□□□□□ -0.57
CopeO89079 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.47□□□□□ -0.57
CopeO89079 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CopeO89079 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.47□□□□□ -0.57
CopeO89079 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gm43058-201ENSMUST00000197645 625 ntBASIC11.47□□□□□ -0.57
CopeO89079 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.47□□□□□ -0.57
CopeO89079 Gm43822-201ENSMUST00000200285 476 ntBASIC11.47□□□□□ -0.57
CopeO89079 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
CopeO89079 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CopeO89079 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.47□□□□□ -0.57
CopeO89079 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 AA474408-201ENSMUST00000098110 3339 ntBASIC11.47□□□□□ -0.57
CopeO89079 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CopeO89079 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CopeO89079 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Gm25148-201ENSMUST00000104611 123 ntBASIC11.46□□□□□ -0.57
CopeO89079 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Gm12579-201ENSMUST00000118040 783 ntBASIC11.46□□□□□ -0.57
CopeO89079 Gm14130-201ENSMUST00000118417 987 ntBASIC11.46□□□□□ -0.57
CopeO89079 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Gm15329-201ENSMUST00000121408 155 ntBASIC11.46□□□□□ -0.57
CopeO89079 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CopeO89079 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.46□□□□□ -0.57
CopeO89079 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.46□□□□□ -0.57
CopeO89079 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.46□□□□□ -0.57
CopeO89079 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.46□□□□□ -0.57
CopeO89079 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.46□□□□□ -0.57
CopeO89079 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CopeO89079 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CopeO89079 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CopeO89079 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CopeO89079 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CopeO89079 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.46□□□□□ -0.58
CopeO89079 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
CopeO89079 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CopeO89079 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CopeO89079 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CopeO89079 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CopeO89079 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CopeO89079 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CopeO89079 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.45□□□□□ -0.58
CopeO89079 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms