Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldn6Q9Z262 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cldn6Q9Z262 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Gm9870-201ENSMUST00000063874 645 ntBASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldn6Q9Z262 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.93■□□□□ 0.62
Cldn6Q9Z262 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Gm45102-201ENSMUST00000207427 857 ntBASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cldn6Q9Z262 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Gm14117-201ENSMUST00000122417 843 ntBASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Rps24-207ENSMUST00000224568 714 ntBASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldn6Q9Z262 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Gm22238-201ENSMUST00000175222 88 ntBASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cldn6Q9Z262 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn6Q9Z262 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn6Q9Z262 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn6Q9Z262 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn6Q9Z262 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn6Q9Z262 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.89■□□□□ 0.61
Cldn6Q9Z262 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn6Q9Z262 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn6Q9Z262 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms