Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox1Q9JJ43 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rbfox1Q9JJ43 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox1Q9JJ43 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox1Q9JJ43 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.22■□□□□ 0.35
Rbfox1Q9JJ43 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rbfox1Q9JJ43 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rbfox1Q9JJ43 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rbfox1Q9JJ43 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rbfox1Q9JJ43 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rbfox1Q9JJ43 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Gm5921-201ENSMUST00000075898 882 ntBASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rbfox1Q9JJ43 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rbfox1Q9JJ43 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.17■□□□□ 0.34
Rbfox1Q9JJ43 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox1Q9JJ43 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox1Q9JJ43 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.17■□□□□ 0.34
Rbfox1Q9JJ43 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rbfox1Q9JJ43 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rbfox1Q9JJ43 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rbfox1Q9JJ43 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Cap2-205ENSMUST00000225824 1634 ntBASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rbfox1Q9JJ43 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rbfox1Q9JJ43 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rbfox1Q9JJ43 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms