Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clca3a2Q9EQR4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clca3a2Q9EQR4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clca3a2Q9EQR4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clca3a2Q9EQR4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clca3a2Q9EQR4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clca3a2Q9EQR4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clca3a2Q9EQR4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clca3a2Q9EQR4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clca3a2Q9EQR4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.33■□□□□ 0.68
Clca3a2Q9EQR4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clca3a2Q9EQR4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clca3a2Q9EQR4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.33■□□□□ 0.68
Clca3a2Q9EQR4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Clca3a2Q9EQR4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a2Q9EQR4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a2Q9EQR4 Gm12922-201ENSMUST00000120626 809 ntBASIC19.31■□□□□ 0.68
Clca3a2Q9EQR4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clca3a2Q9EQR4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.31■□□□□ 0.68
Clca3a2Q9EQR4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clca3a2Q9EQR4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Clca3a2Q9EQR4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.29■□□□□ 0.68
Clca3a2Q9EQR4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clca3a2Q9EQR4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clca3a2Q9EQR4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms