Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ssr3Q9DCF9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Ssr3Q9DCF9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ssr3Q9DCF9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ssr3Q9DCF9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Gm8503-201ENSMUST00000118131 455 ntBASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ssr3Q9DCF9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ssr3Q9DCF9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ssr3Q9DCF9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.02■□□□□ 0.47
Ssr3Q9DCF9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssr3Q9DCF9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssr3Q9DCF9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18■□□□□ 0.47
Ssr3Q9DCF9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18■□□□□ 0.47
Ssr3Q9DCF9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssr3Q9DCF9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18■□□□□ 0.47
Ssr3Q9DCF9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.99■□□□□ 0.47
Ssr3Q9DCF9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms