Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1aQ9D132 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1aQ9D132 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1aQ9D132 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.22■□□□□ 0.67
Upk1aQ9D132 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk1aQ9D132 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.21■□□□□ 0.67
Upk1aQ9D132 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
Upk1aQ9D132 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk1aQ9D132 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Upk1aQ9D132 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk1aQ9D132 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.17■□□□□ 0.66
Upk1aQ9D132 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk1aQ9D132 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Upk1aQ9D132 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1aQ9D132 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1aQ9D132 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1aQ9D132 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Upk1aQ9D132 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1aQ9D132 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1aQ9D132 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk1aQ9D132 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk1aQ9D132 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Upk1aQ9D132 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1aQ9D132 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1aQ9D132 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1aQ9D132 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Upk1aQ9D132 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.14■□□□□ 0.65
Upk1aQ9D132 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms