Protein–RNA interactions for Protein: Q9CY34

Ube2f, NEDD8-conjugating enzyme UBE2F, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fQ9CY34 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ube2fQ9CY34 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ube2fQ9CY34 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube2fQ9CY34 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Gm12366-201ENSMUST00000121722 873 ntBASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Gm5786-201ENSMUST00000085368 882 ntBASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube2fQ9CY34 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.18■□□□□ 0.5
Ube2fQ9CY34 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube2fQ9CY34 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube2fQ9CY34 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ube2fQ9CY34 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ube2fQ9CY34 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ube2fQ9CY34 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.13■□□□□ 0.49
Ube2fQ9CY34 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ube2fQ9CY34 Gm7332-201ENSMUST00000118351 454 ntBASIC18.13■□□□□ 0.49
Ube2fQ9CY34 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube2fQ9CY34 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube2fQ9CY34 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ube2fQ9CY34 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ube2fQ9CY34 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ube2fQ9CY34 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms