Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Khdc3Q9CWU5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc3Q9CWU5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc3Q9CWU5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc3Q9CWU5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc3Q9CWU5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Khdc3Q9CWU5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.34■□□□□ 0.69
Khdc3Q9CWU5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Khdc3Q9CWU5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Khdc3Q9CWU5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Khdc3Q9CWU5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Khdc3Q9CWU5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Khdc3Q9CWU5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc3Q9CWU5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc3Q9CWU5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.32■□□□□ 0.68
Khdc3Q9CWU5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc3Q9CWU5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc3Q9CWU5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Khdc3Q9CWU5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Khdc3Q9CWU5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Khdc3Q9CWU5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Gm14117-201ENSMUST00000122417 843 ntBASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Gm7143-201ENSMUST00000222811 859 ntBASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Rps24-207ENSMUST00000224568 714 ntBASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc3Q9CWU5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Khdc3Q9CWU5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Gm45102-201ENSMUST00000207427 857 ntBASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Khdc3Q9CWU5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms