Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Gm6139-201ENSMUST00000079261 882 ntBASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lsm7Q9CQQ8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Gm8493-201ENSMUST00000196881 489 ntBASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lsm7Q9CQQ8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Lsm7Q9CQQ8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.43■□□□□ 0.86
Lsm7Q9CQQ8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsm7Q9CQQ8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm7Q9CQQ8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm7Q9CQQ8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm7Q9CQQ8 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.4■□□□□ 0.86
Lsm7Q9CQQ8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Lsm7Q9CQQ8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lsm7Q9CQQ8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm7Q9CQQ8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lsm7Q9CQQ8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm7Q9CQQ8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms