Protein–RNA interactions for Protein: Q9CQH0

Pdzk1ip1, PDZK1-interacting protein 1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzk1ip1Q9CQH0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm4799-201ENSMUST00000095396 657 ntBASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdzk1ip1Q9CQH0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdzk1ip1Q9CQH0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pdzk1ip1Q9CQH0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzk1ip1Q9CQH0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.33■□□□□ 0.37
Pdzk1ip1Q9CQH0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzk1ip1Q9CQH0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdzk1ip1Q9CQH0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.33■□□□□ 0.36
Pdzk1ip1Q9CQH0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzk1ip1Q9CQH0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzk1ip1Q9CQH0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdzk1ip1Q9CQH0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pdzk1ip1Q9CQH0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.31■□□□□ 0.36
Pdzk1ip1Q9CQH0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm6821-201ENSMUST00000107540 542 ntBASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pdzk1ip1Q9CQH0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdzk1ip1Q9CQH0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.27■□□□□ 0.36
Pdzk1ip1Q9CQH0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Pdzk1ip1Q9CQH0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.27■□□□□ 0.36
Pdzk1ip1Q9CQH0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzk1ip1Q9CQH0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pdzk1ip1Q9CQH0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdzk1ip1Q9CQH0 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms