Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.62■□□□□ 0.73
Trim16Q99PP9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.62■□□□□ 0.73
Trim16Q99PP9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim16Q99PP9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim16Q99PP9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim16Q99PP9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim16Q99PP9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim16Q99PP9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.6■□□□□ 0.73
Trim16Q99PP9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim16Q99PP9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim16Q99PP9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim16Q99PP9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim16Q99PP9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim16Q99PP9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim16Q99PP9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim16Q99PP9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim16Q99PP9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.58■□□□□ 0.72
Trim16Q99PP9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim16Q99PP9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim16Q99PP9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim16Q99PP9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim16Q99PP9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim16Q99PP9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.57■□□□□ 0.72
Trim16Q99PP9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim16Q99PP9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim16Q99PP9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.55■□□□□ 0.72
Trim16Q99PP9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim16Q99PP9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim16Q99PP9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim16Q99PP9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim16Q99PP9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim16Q99PP9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms