Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim8Q99PJ2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trim8Q99PJ2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim8Q99PJ2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim8Q99PJ2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim8Q99PJ2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim8Q99PJ2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim8Q99PJ2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim8Q99PJ2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim8Q99PJ2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim8Q99PJ2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim8Q99PJ2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim8Q99PJ2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim8Q99PJ2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim8Q99PJ2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim8Q99PJ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim8Q99PJ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim8Q99PJ2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim8Q99PJ2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim8Q99PJ2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim8Q99PJ2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim8Q99PJ2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim8Q99PJ2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim8Q99PJ2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim8Q99PJ2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms