Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trem2Q99NH8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trem2Q99NH8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trem2Q99NH8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trem2Q99NH8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trem2Q99NH8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trem2Q99NH8 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.65■□□□□ 0.9
Trem2Q99NH8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trem2Q99NH8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trem2Q99NH8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trem2Q99NH8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trem2Q99NH8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Trem2Q99NH8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trem2Q99NH8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trem2Q99NH8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Trem2Q99NH8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Trem2Q99NH8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trem2Q99NH8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.64■□□□□ 0.89
Trem2Q99NH8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trem2Q99NH8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trem2Q99NH8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Trem2Q99NH8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.63■□□□□ 0.89
Trem2Q99NH8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.63■□□□□ 0.89
Trem2Q99NH8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trem2Q99NH8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trem2Q99NH8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trem2Q99NH8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Etf1-202ENSMUST00000180351 108 ntBASIC20.61■□□□□ 0.89
Trem2Q99NH8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trem2Q99NH8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trem2Q99NH8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trem2Q99NH8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trem2Q99NH8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trem2Q99NH8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trem2Q99NH8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Trem2Q99NH8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trem2Q99NH8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.6■□□□□ 0.89
Trem2Q99NH8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Trem2Q99NH8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trem2Q99NH8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.58■□□□□ 0.89
Trem2Q99NH8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms