Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.35■□□□□ 0.85
Cttnbp2nlQ99LJ0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cttnbp2nlQ99LJ0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cttnbp2nlQ99LJ0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cttnbp2nlQ99LJ0 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.33■□□□□ 0.85
Cttnbp2nlQ99LJ0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cttnbp2nlQ99LJ0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cttnbp2nlQ99LJ0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cttnbp2nlQ99LJ0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cttnbp2nlQ99LJ0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cttnbp2nlQ99LJ0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cttnbp2nlQ99LJ0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cttnbp2nlQ99LJ0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cttnbp2nlQ99LJ0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cttnbp2nlQ99LJ0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cttnbp2nlQ99LJ0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cttnbp2nlQ99LJ0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cttnbp2nlQ99LJ0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cttnbp2nlQ99LJ0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cttnbp2nlQ99LJ0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.27■□□□□ 0.84
Cttnbp2nlQ99LJ0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.27■□□□□ 0.83
Cttnbp2nlQ99LJ0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cttnbp2nlQ99LJ0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cttnbp2nlQ99LJ0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cttnbp2nlQ99LJ0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Cttnbp2nlQ99LJ0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cttnbp2nlQ99LJ0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms