Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha1Q91Y21 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha1Q91Y21 Gm43530-201ENSMUST00000195920 274 ntBASIC21.09■□□□□ 0.97
Pcdha1Q91Y21 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdha1Q91Y21 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha1Q91Y21 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 Mir7075-201ENSMUST00000184187 82 ntBASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha1Q91Y21 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Pcdha1Q91Y21 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha1Q91Y21 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha1Q91Y21 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha1Q91Y21 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Pcdha1Q91Y21 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdha1Q91Y21 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha1Q91Y21 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha1Q91Y21 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Pcdha1Q91Y21 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdha1Q91Y21 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha1Q91Y21 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdha1Q91Y21 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha1Q91Y21 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdha1Q91Y21 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha1Q91Y21 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha1Q91Y21 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha1Q91Y21 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Pcdha1Q91Y21 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Pcdha1Q91Y21 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha1Q91Y21 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha1Q91Y21 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Pcdha1Q91Y21 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms