Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhgb4Q91XX6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhgb4Q91XX6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhgb4Q91XX6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.4■■□□□ 1.02
Pcdhgb4Q91XX6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb4Q91XX6 Gm15546-201ENSMUST00000122095 826 ntBASIC21.4■■□□□ 1.02
Pcdhgb4Q91XX6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhgb4Q91XX6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhgb4Q91XX6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhgb4Q91XX6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhgb4Q91XX6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhgb4Q91XX6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pcdhgb4Q91XX6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb4Q91XX6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhgb4Q91XX6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb4Q91XX6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.36■■□□□ 1.01
Pcdhgb4Q91XX6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pcdhgb4Q91XX6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhgb4Q91XX6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb4Q91XX6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb4Q91XX6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb4Q91XX6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
Pcdhgb4Q91XX6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb4Q91XX6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgb4Q91XX6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb4Q91XX6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Gm7143-201ENSMUST00000222811 859 ntBASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb4Q91XX6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgb4Q91XX6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdhgb4Q91XX6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb4Q91XX6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhgb4Q91XX6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb4Q91XX6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb4Q91XX6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb4Q91XX6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms