Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ndc1Q8VCB1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ndc1Q8VCB1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
Ndc1Q8VCB1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ndc1Q8VCB1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ndc1Q8VCB1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.02■□□□□ 0.63
Ndc1Q8VCB1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ndc1Q8VCB1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ndc1Q8VCB1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ndc1Q8VCB1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndc1Q8VCB1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Ndc1Q8VCB1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ndc1Q8VCB1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Mir7075-201ENSMUST00000184187 82 ntBASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Gm6139-201ENSMUST00000079261 882 ntBASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ndc1Q8VCB1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndc1Q8VCB1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ndc1Q8VCB1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ndc1Q8VCB1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Gm43530-201ENSMUST00000195920 274 ntBASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.95■□□□□ 0.62
Ndc1Q8VCB1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms