Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna3Q8R4G9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna3Q8R4G9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna3Q8R4G9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna3Q8R4G9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chrna3Q8R4G9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chrna3Q8R4G9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.83■□□□□ 0.77
Chrna3Q8R4G9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chrna3Q8R4G9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chrna3Q8R4G9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.82■□□□□ 0.76
Chrna3Q8R4G9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna3Q8R4G9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna3Q8R4G9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna3Q8R4G9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Chrna3Q8R4G9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.81■□□□□ 0.76
Chrna3Q8R4G9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna3Q8R4G9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.8■□□□□ 0.76
Chrna3Q8R4G9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna3Q8R4G9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.8■□□□□ 0.76
Chrna3Q8R4G9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna3Q8R4G9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna3Q8R4G9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna3Q8R4G9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Chrna3Q8R4G9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chrna3Q8R4G9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.78■□□□□ 0.76
Chrna3Q8R4G9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chrna3Q8R4G9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Chrna3Q8R4G9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chrna3Q8R4G9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chrna3Q8R4G9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms