Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Ddx54Q8K4L0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx54Q8K4L0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ddx54Q8K4L0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ddx54Q8K4L0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Gm8520-201ENSMUST00000186517 868 ntBASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx54Q8K4L0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
Ddx54Q8K4L0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Ddx54Q8K4L0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Gm12527-201ENSMUST00000117967 564 ntBASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 AC158538.1-201ENSMUST00000225870 294 ntBASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx54Q8K4L0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx54Q8K4L0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Gm42555-201ENSMUST00000199304 1039 ntBASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms