Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Ddx54Q8K4L0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx54Q8K4L0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ddx54Q8K4L0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ddx54Q8K4L0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx54Q8K4L0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Gm8520-201ENSMUST00000186517 868 ntBASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx54Q8K4L0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx54Q8K4L0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
Ddx54Q8K4L0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Ddx54Q8K4L0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Gm12527-201ENSMUST00000117967 564 ntBASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 AC158538.1-201ENSMUST00000225870 294 ntBASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ddx54Q8K4L0 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Ddx54Q8K4L0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx54Q8K4L0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx54Q8K4L0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC26.82■■□□□ 1.88
Ddx54Q8K4L0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Gm42555-201ENSMUST00000199304 1039 ntBASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Ddx54Q8K4L0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ddx54Q8K4L0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Ddx54Q8K4L0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx54Q8K4L0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx54Q8K4L0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx54Q8K4L0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx54Q8K4L0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms