Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Cchcr1Q8K2I2 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cchcr1Q8K2I2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Gm7143-201ENSMUST00000222811 859 ntBASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cchcr1Q8K2I2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cchcr1Q8K2I2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cchcr1Q8K2I2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cchcr1Q8K2I2 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.91■■□□□ 1.42
Cchcr1Q8K2I2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.91■■□□□ 1.42
Cchcr1Q8K2I2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cchcr1Q8K2I2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Cchcr1Q8K2I2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cchcr1Q8K2I2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cchcr1Q8K2I2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cchcr1Q8K2I2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cchcr1Q8K2I2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cchcr1Q8K2I2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cchcr1Q8K2I2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cchcr1Q8K2I2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cchcr1Q8K2I2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.84■■□□□ 1.41
Cchcr1Q8K2I2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cchcr1Q8K2I2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.84■■□□□ 1.41
Cchcr1Q8K2I2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cchcr1Q8K2I2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cchcr1Q8K2I2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cchcr1Q8K2I2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cchcr1Q8K2I2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.83■■□□□ 1.41
Cchcr1Q8K2I2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cchcr1Q8K2I2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Cchcr1Q8K2I2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
Cchcr1Q8K2I2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cchcr1Q8K2I2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Cchcr1Q8K2I2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms