Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox30Q8CGW4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox30Q8CGW4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sox30Q8CGW4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox30Q8CGW4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sox30Q8CGW4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox30Q8CGW4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sox30Q8CGW4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox30Q8CGW4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox30Q8CGW4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sox30Q8CGW4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sox30Q8CGW4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sox30Q8CGW4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Sox30Q8CGW4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sox30Q8CGW4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Gm10399-202ENSMUST00000202768 748 ntBASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sox30Q8CGW4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Gm13238-201ENSMUST00000117655 780 ntBASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sox30Q8CGW4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Gm43566-201ENSMUST00000196851 808 ntBASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.21■■□□□ 1.15
Sox30Q8CGW4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.2■■□□□ 1.15
Sox30Q8CGW4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Sox30Q8CGW4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Sox30Q8CGW4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Gm7143-201ENSMUST00000222811 859 ntBASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sox30Q8CGW4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms