Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rdh1Q8CGV4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rdh1Q8CGV4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Gm43173-201ENSMUST00000202246 593 ntBASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Spcs1-204ENSMUST00000226782 949 ntBASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rdh1Q8CGV4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rdh1Q8CGV4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh1Q8CGV4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh1Q8CGV4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh1Q8CGV4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh1Q8CGV4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rdh1Q8CGV4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rdh1Q8CGV4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rdh1Q8CGV4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rdh1Q8CGV4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rdh1Q8CGV4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rdh1Q8CGV4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.64■□□□□ 0.73
Rdh1Q8CGV4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rdh1Q8CGV4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms