Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rbm28Q8CGC6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rbm28Q8CGC6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.86■■□□□ 1.41
Rbm28Q8CGC6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rbm28Q8CGC6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Gm43530-201ENSMUST00000195920 274 ntBASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rbm28Q8CGC6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rbm28Q8CGC6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rbm28Q8CGC6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rbm28Q8CGC6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.83■■□□□ 1.41
Rbm28Q8CGC6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.83■■□□□ 1.41
Rbm28Q8CGC6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rbm28Q8CGC6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
Rbm28Q8CGC6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rbm28Q8CGC6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rbm28Q8CGC6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rbm28Q8CGC6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Rbm28Q8CGC6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.8■■□□□ 1.4
Rbm28Q8CGC6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Rbm28Q8CGC6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rbm28Q8CGC6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Gm8493-201ENSMUST00000196881 489 ntBASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Gm43017-201ENSMUST00000198296 752 ntBASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rbm28Q8CGC6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
Rbm28Q8CGC6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rbm28Q8CGC6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
Rbm28Q8CGC6 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.77■■□□□ 1.4
Rbm28Q8CGC6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.77■■□□□ 1.4
Rbm28Q8CGC6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rbm28Q8CGC6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Rbm28Q8CGC6 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.76■■□□□ 1.39
Rbm28Q8CGC6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rbm28Q8CGC6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms