Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ShfQ8CG80 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ShfQ8CG80 Gm13238-201ENSMUST00000117655 780 ntBASIC18.09■□□□□ 0.49
ShfQ8CG80 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ShfQ8CG80 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ShfQ8CG80 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ShfQ8CG80 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ShfQ8CG80 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ShfQ8CG80 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ShfQ8CG80 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ShfQ8CG80 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
ShfQ8CG80 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.08■□□□□ 0.48
ShfQ8CG80 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.08■□□□□ 0.48
ShfQ8CG80 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ShfQ8CG80 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ShfQ8CG80 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ShfQ8CG80 Cap2-205ENSMUST00000225824 1634 ntBASIC18.07■□□□□ 0.48
ShfQ8CG80 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ShfQ8CG80 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ShfQ8CG80 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.06■□□□□ 0.48
ShfQ8CG80 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ShfQ8CG80 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.06■□□□□ 0.48
ShfQ8CG80 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ShfQ8CG80 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.06■□□□□ 0.48
ShfQ8CG80 Gm5921-201ENSMUST00000075898 882 ntBASIC18.06■□□□□ 0.48
ShfQ8CG80 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ShfQ8CG80 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShfQ8CG80 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.05■□□□□ 0.48
ShfQ8CG80 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShfQ8CG80 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShfQ8CG80 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShfQ8CG80 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ShfQ8CG80 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.05■□□□□ 0.48
ShfQ8CG80 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.05■□□□□ 0.48
ShfQ8CG80 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ShfQ8CG80 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ShfQ8CG80 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ShfQ8CG80 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShfQ8CG80 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ShfQ8CG80 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShfQ8CG80 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShfQ8CG80 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShfQ8CG80 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ShfQ8CG80 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ShfQ8CG80 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.03■□□□□ 0.48
ShfQ8CG80 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ShfQ8CG80 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShfQ8CG80 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShfQ8CG80 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShfQ8CG80 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ShfQ8CG80 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.02■□□□□ 0.48
ShfQ8CG80 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ShfQ8CG80 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ShfQ8CG80 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ShfQ8CG80 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.02■□□□□ 0.47
ShfQ8CG80 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ShfQ8CG80 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.01■□□□□ 0.47
ShfQ8CG80 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.01■□□□□ 0.47
ShfQ8CG80 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ShfQ8CG80 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ShfQ8CG80 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ShfQ8CG80 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ShfQ8CG80 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShfQ8CG80 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShfQ8CG80 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18■□□□□ 0.47
ShfQ8CG80 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18■□□□□ 0.47
ShfQ8CG80 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ShfQ8CG80 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShfQ8CG80 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18■□□□□ 0.47
ShfQ8CG80 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ShfQ8CG80 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.99■□□□□ 0.47
ShfQ8CG80 Gm7143-201ENSMUST00000222811 859 ntBASIC17.99■□□□□ 0.47
ShfQ8CG80 Gm10232-201ENSMUST00000089221 720 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms