Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smc5Q8CG46 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smc5Q8CG46 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Smc5Q8CG46 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Smc5Q8CG46 Hsf1-204ENSMUST00000226872 2104 ntBASIC25.18■■□□□ 1.62
Smc5Q8CG46 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.18■■□□□ 1.62
Smc5Q8CG46 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Smc5Q8CG46 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Smc5Q8CG46 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Smc5Q8CG46 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Smc5Q8CG46 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smc5Q8CG46 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smc5Q8CG46 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.16■■□□□ 1.62
Smc5Q8CG46 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Smc5Q8CG46 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC25.16■■□□□ 1.62
Smc5Q8CG46 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smc5Q8CG46 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smc5Q8CG46 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.15■■□□□ 1.62
Smc5Q8CG46 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smc5Q8CG46 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smc5Q8CG46 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smc5Q8CG46 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smc5Q8CG46 Gm43566-201ENSMUST00000196851 808 ntBASIC25.14■■□□□ 1.62
Smc5Q8CG46 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Smc5Q8CG46 Cap2-205ENSMUST00000225824 1634 ntBASIC25.14■■□□□ 1.61
Smc5Q8CG46 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Smc5Q8CG46 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Smc5Q8CG46 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.13■■□□□ 1.61
Smc5Q8CG46 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc5Q8CG46 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC25.13■■□□□ 1.61
Smc5Q8CG46 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smc5Q8CG46 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Smc5Q8CG46 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Smc5Q8CG46 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Smc5Q8CG46 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Gm10399-202ENSMUST00000202768 748 ntBASIC25.09■■□□□ 1.61
Smc5Q8CG46 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Smc5Q8CG46 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Smc5Q8CG46 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Smc5Q8CG46 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.07■■□□□ 1.6
Smc5Q8CG46 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.07■■□□□ 1.6
Smc5Q8CG46 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc5Q8CG46 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Smc5Q8CG46 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smc5Q8CG46 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 263.3 ms