Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a2Q8CA03 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a2Q8CA03 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Gm12366-201ENSMUST00000121722 873 ntBASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Gm5786-201ENSMUST00000085368 882 ntBASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a2Q8CA03 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a2Q8CA03 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Gm7332-201ENSMUST00000118351 454 ntBASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc46a2Q8CA03 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a2Q8CA03 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc46a2Q8CA03 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc46a2Q8CA03 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc46a2Q8CA03 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms