Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.54■□□□□ 0.88
Rfx6Q8C7R7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.54■□□□□ 0.88
Rfx6Q8C7R7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx6Q8C7R7 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.54■□□□□ 0.88
Rfx6Q8C7R7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx6Q8C7R7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.53■□□□□ 0.88
Rfx6Q8C7R7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx6Q8C7R7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx6Q8C7R7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Rfx6Q8C7R7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx6Q8C7R7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx6Q8C7R7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx6Q8C7R7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx6Q8C7R7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx6Q8C7R7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx6Q8C7R7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx6Q8C7R7 Cap2-205ENSMUST00000225824 1634 ntBASIC20.47■□□□□ 0.87
Rfx6Q8C7R7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.47■□□□□ 0.87
Rfx6Q8C7R7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx6Q8C7R7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx6Q8C7R7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.46■□□□□ 0.87
Rfx6Q8C7R7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx6Q8C7R7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.46■□□□□ 0.87
Rfx6Q8C7R7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx6Q8C7R7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx6Q8C7R7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms