Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap54Q8C6S9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 Gm10653-202ENSMUST00000139570 835 ntBASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap54Q8C6S9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cfap54Q8C6S9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfap54Q8C6S9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cfap54Q8C6S9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.67■□□□□ 0.74
Cfap54Q8C6S9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 Gm12527-201ENSMUST00000117967 564 ntBASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfap54Q8C6S9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.65■□□□□ 0.74
Cfap54Q8C6S9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cfap54Q8C6S9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap54Q8C6S9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap54Q8C6S9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.64■□□□□ 0.73
Cfap54Q8C6S9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.64■□□□□ 0.73
Cfap54Q8C6S9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap54Q8C6S9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap54Q8C6S9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cfap54Q8C6S9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms