Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tsen54Q8C2A2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tsen54Q8C2A2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tsen54Q8C2A2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tsen54Q8C2A2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tsen54Q8C2A2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Tsen54Q8C2A2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tsen54Q8C2A2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.76■□□□□ 0.27
Tsen54Q8C2A2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.75■□□□□ 0.27
Tsen54Q8C2A2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tsen54Q8C2A2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms