Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ppp4r4Q8C0Y0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ppp4r4Q8C0Y0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ppp4r4Q8C0Y0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ppp4r4Q8C0Y0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ppp4r4Q8C0Y0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ppp4r4Q8C0Y0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ppp4r4Q8C0Y0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp4r4Q8C0Y0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp4r4Q8C0Y0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ppp4r4Q8C0Y0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.27■□□□□ 0.83
Ppp4r4Q8C0Y0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ppp4r4Q8C0Y0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.26■□□□□ 0.83
Ppp4r4Q8C0Y0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Ppp4r4Q8C0Y0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp4r4Q8C0Y0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp4r4Q8C0Y0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.26■□□□□ 0.83
Ppp4r4Q8C0Y0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp4r4Q8C0Y0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp4r4Q8C0Y0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.24■□□□□ 0.83
Ppp4r4Q8C0Y0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp4r4Q8C0Y0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp4r4Q8C0Y0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.21■□□□□ 0.83
Ppp4r4Q8C0Y0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms