Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trub1Q8C0D0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Rps24-207ENSMUST00000224568 714 ntBASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trub1Q8C0D0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.9■□□□□ 0.94
Trub1Q8C0D0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trub1Q8C0D0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trub1Q8C0D0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trub1Q8C0D0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trub1Q8C0D0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Trub1Q8C0D0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.89■□□□□ 0.93
Trub1Q8C0D0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trub1Q8C0D0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trub1Q8C0D0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.89■□□□□ 0.93
Trub1Q8C0D0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trub1Q8C0D0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trub1Q8C0D0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Trub1Q8C0D0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trub1Q8C0D0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trub1Q8C0D0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trub1Q8C0D0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trub1Q8C0D0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trub1Q8C0D0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Trub1Q8C0D0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trub1Q8C0D0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Trub1Q8C0D0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trub1Q8C0D0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trub1Q8C0D0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trub1Q8C0D0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trub1Q8C0D0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trub1Q8C0D0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trub1Q8C0D0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms