Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm11Q8BUV6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm11Q8BUV6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm11Q8BUV6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm11Q8BUV6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Lsm11Q8BUV6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.14■□□□□ 0.33
Lsm11Q8BUV6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm11Q8BUV6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm11Q8BUV6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lsm11Q8BUV6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lsm11Q8BUV6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm11Q8BUV6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms