Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne3Q8BT60 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne3Q8BT60 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne3Q8BT60 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.41■□□□□ 0.7
Cpne3Q8BT60 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne3Q8BT60 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cpne3Q8BT60 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne3Q8BT60 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpne3Q8BT60 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms