Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdkl3Q8BLF2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdkl3Q8BLF2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdkl3Q8BLF2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdkl3Q8BLF2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdkl3Q8BLF2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl3Q8BLF2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl3Q8BLF2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl3Q8BLF2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdkl3Q8BLF2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Mir3960-201ENSMUST00000198213 73 ntBASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdkl3Q8BLF2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Gm9812-201ENSMUST00000061934 968 ntBASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdkl3Q8BLF2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdkl3Q8BLF2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms