Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hmbox1Q8BJA3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hmbox1Q8BJA3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmbox1Q8BJA3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmbox1Q8BJA3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Gm43017-201ENSMUST00000198296 752 ntBASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmbox1Q8BJA3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hmbox1Q8BJA3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmbox1Q8BJA3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hmbox1Q8BJA3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Hmbox1Q8BJA3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmbox1Q8BJA3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmbox1Q8BJA3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmbox1Q8BJA3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmbox1Q8BJA3 Gm27011-201ENSMUST00000182352 972 ntBASIC19.58■□□□□ 0.72
Hmbox1Q8BJA3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.58■□□□□ 0.72
Hmbox1Q8BJA3 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.58■□□□□ 0.72
Hmbox1Q8BJA3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmbox1Q8BJA3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hmbox1Q8BJA3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmbox1Q8BJA3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms