Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Limd2Q8BGB5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Limd2Q8BGB5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Gm4419-202ENSMUST00000226239 1431 ntBASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Limd2Q8BGB5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Limd2Q8BGB5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Gm38342-201ENSMUST00000195710 2980 ntBASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Limd2Q8BGB5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Limd2Q8BGB5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Limd2Q8BGB5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Limd2Q8BGB5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms