Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.52■■□□□ 1.04
Rnf168Q80XJ2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf168Q80XJ2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf168Q80XJ2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf168Q80XJ2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf168Q80XJ2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf168Q80XJ2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf168Q80XJ2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Gm43530-201ENSMUST00000195920 274 ntBASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.46■■□□□ 1.03
Rnf168Q80XJ2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf168Q80XJ2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Gm43173-201ENSMUST00000202246 593 ntBASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.44■■□□□ 1.02
Rnf168Q80XJ2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf168Q80XJ2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf168Q80XJ2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf168Q80XJ2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Rnf168Q80XJ2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf168Q80XJ2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf168Q80XJ2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf168Q80XJ2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Rnf168Q80XJ2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms