Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ush1gQ80T11 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ush1gQ80T11 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ush1gQ80T11 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.14■■□□□ 1.14
Ush1gQ80T11 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ush1gQ80T11 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Ush1gQ80T11 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ush1gQ80T11 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.14■■□□□ 1.13
Ush1gQ80T11 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
Ush1gQ80T11 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ush1gQ80T11 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ush1gQ80T11 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Ush1gQ80T11 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Ush1gQ80T11 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ush1gQ80T11 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.12■■□□□ 1.13
Ush1gQ80T11 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ush1gQ80T11 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
Ush1gQ80T11 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.11■■□□□ 1.13
Ush1gQ80T11 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ush1gQ80T11 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Gm26833-201ENSMUST00000180899 440 ntBASIC22.1■■□□□ 1.13
Ush1gQ80T11 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.1■■□□□ 1.13
Ush1gQ80T11 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ush1gQ80T11 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ush1gQ80T11 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.09■■□□□ 1.13
Ush1gQ80T11 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ush1gQ80T11 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ush1gQ80T11 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ush1gQ80T11 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.08■■□□□ 1.13
Ush1gQ80T11 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ush1gQ80T11 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
Ush1gQ80T11 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ush1gQ80T11 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ush1gQ80T11 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ush1gQ80T11 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ush1gQ80T11 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ush1gQ80T11 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.07■■□□□ 1.12
Ush1gQ80T11 Gm12251-201ENSMUST00000117893 792 ntBASIC22.07■■□□□ 1.12
Ush1gQ80T11 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.07■■□□□ 1.12
Ush1gQ80T11 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ush1gQ80T11 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Ush1gQ80T11 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ush1gQ80T11 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Gm7291-201ENSMUST00000199147 382 ntBASIC22.06■■□□□ 1.12
Ush1gQ80T11 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ush1gQ80T11 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ush1gQ80T11 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ush1gQ80T11 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ush1gQ80T11 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms