Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh8Q7TSK3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.9■□□□□ 0.78
Pcdh8Q7TSK3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh8Q7TSK3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh8Q7TSK3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdh8Q7TSK3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh8Q7TSK3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh8Q7TSK3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Gm8493-201ENSMUST00000196881 489 ntBASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdh8Q7TSK3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh8Q7TSK3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh8Q7TSK3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Gm43017-201ENSMUST00000198296 752 ntBASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdh8Q7TSK3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdh8Q7TSK3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh8Q7TSK3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh8Q7TSK3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh8Q7TSK3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh8Q7TSK3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh8Q7TSK3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pcdh8Q7TSK3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdh8Q7TSK3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms