Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssx9Q6XAS3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ssx9Q6XAS3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssx9Q6XAS3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ssx9Q6XAS3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssx9Q6XAS3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssx9Q6XAS3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssx9Q6XAS3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssx9Q6XAS3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.14■□□□□ 0.81
Ssx9Q6XAS3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssx9Q6XAS3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.12■□□□□ 0.81
Ssx9Q6XAS3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssx9Q6XAS3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.1■□□□□ 0.81
Ssx9Q6XAS3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssx9Q6XAS3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssx9Q6XAS3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.1■□□□□ 0.81
Ssx9Q6XAS3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssx9Q6XAS3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.08■□□□□ 0.81
Ssx9Q6XAS3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ssx9Q6XAS3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ssx9Q6XAS3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssx9Q6XAS3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ssx9Q6XAS3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms