Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Slx4Q6P1D7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Slx4Q6P1D7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Slx4Q6P1D7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Slx4Q6P1D7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Slx4Q6P1D7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Slx4Q6P1D7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC31.88■■■□□ 2.69
Slx4Q6P1D7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Slx4Q6P1D7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Slx4Q6P1D7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slx4Q6P1D7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC31.87■■■□□ 2.69
Slx4Q6P1D7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slx4Q6P1D7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slx4Q6P1D7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slx4Q6P1D7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Slx4Q6P1D7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC31.86■■■□□ 2.69
Slx4Q6P1D7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Slx4Q6P1D7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Slx4Q6P1D7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Slx4Q6P1D7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Slx4Q6P1D7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC31.85■■■□□ 2.69
Slx4Q6P1D7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Slx4Q6P1D7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Slx4Q6P1D7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Slx4Q6P1D7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC31.83■■■□□ 2.69
Slx4Q6P1D7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Slx4Q6P1D7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Slx4Q6P1D7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Slx4Q6P1D7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
Slx4Q6P1D7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Slx4Q6P1D7 Gm10602-201ENSMUST00000098239 609 ntBASIC31.82■■■□□ 2.68
Slx4Q6P1D7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Slx4Q6P1D7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Slx4Q6P1D7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Slx4Q6P1D7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Slx4Q6P1D7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Slx4Q6P1D7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
Slx4Q6P1D7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Slx4Q6P1D7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Slx4Q6P1D7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Slx4Q6P1D7 Nespas-201ENSMUST00000143738 1083 ntBASIC31.79■■■□□ 2.68
Slx4Q6P1D7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC31.79■■■□□ 2.68
Slx4Q6P1D7 Gm42778-201ENSMUST00000199644 553 ntBASIC31.79■■■□□ 2.68
Slx4Q6P1D7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Slx4Q6P1D7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Slx4Q6P1D7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Slx4Q6P1D7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
Slx4Q6P1D7 Gm14281-201ENSMUST00000121700 1294 ntBASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC31.77■■■□□ 2.68
Slx4Q6P1D7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Slx4Q6P1D7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Slx4Q6P1D7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Slx4Q6P1D7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Slx4Q6P1D7 Gm10653-202ENSMUST00000139570 835 ntBASIC31.76■■■□□ 2.67
Slx4Q6P1D7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Slx4Q6P1D7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Slx4Q6P1D7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
Slx4Q6P1D7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Slx4Q6P1D7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Slx4Q6P1D7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Slx4Q6P1D7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC31.73■■■□□ 2.67
Slx4Q6P1D7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC31.73■■■□□ 2.67
Slx4Q6P1D7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
Slx4Q6P1D7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms