Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.89■□□□□ 0.62
ParpbpQ6IRT3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ParpbpQ6IRT3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ParpbpQ6IRT3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ParpbpQ6IRT3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ParpbpQ6IRT3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ParpbpQ6IRT3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.88■□□□□ 0.61
ParpbpQ6IRT3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ParpbpQ6IRT3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ParpbpQ6IRT3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ParpbpQ6IRT3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ParpbpQ6IRT3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ParpbpQ6IRT3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ParpbpQ6IRT3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ParpbpQ6IRT3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ParpbpQ6IRT3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ParpbpQ6IRT3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ParpbpQ6IRT3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ParpbpQ6IRT3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
ParpbpQ6IRT3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ParpbpQ6IRT3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ParpbpQ6IRT3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ParpbpQ6IRT3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.82■□□□□ 0.6
ParpbpQ6IRT3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.82■□□□□ 0.6
ParpbpQ6IRT3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ParpbpQ6IRT3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Gm7143-201ENSMUST00000222811 859 ntBASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ParpbpQ6IRT3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ParpbpQ6IRT3 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.79■□□□□ 0.6
ParpbpQ6IRT3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms