Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col12a1Q60847 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col12a1Q60847 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Col12a1Q60847 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Col12a1Q60847 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Col12a1Q60847 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.46■□□□□ 0.87
Col12a1Q60847 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.45■□□□□ 0.86
Col12a1Q60847 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.45■□□□□ 0.86
Col12a1Q60847 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col12a1Q60847 Gm13234-201ENSMUST00000120010 747 ntBASIC20.44■□□□□ 0.86
Col12a1Q60847 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.44■□□□□ 0.86
Col12a1Q60847 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.44■□□□□ 0.86
Col12a1Q60847 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col12a1Q60847 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Col12a1Q60847 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col12a1Q60847 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col12a1Q60847 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col12a1Q60847 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col12a1Q60847 Mir6982-201ENSMUST00000184354 68 ntBASIC20.44■□□□□ 0.86
Col12a1Q60847 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Col12a1Q60847 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col12a1Q60847 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.43■□□□□ 0.86
Col12a1Q60847 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Col12a1Q60847 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col12a1Q60847 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col12a1Q60847 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col12a1Q60847 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Col12a1Q60847 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col12a1Q60847 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Col12a1Q60847 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.42■□□□□ 0.86
Col12a1Q60847 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.42■□□□□ 0.86
Col12a1Q60847 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col12a1Q60847 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col12a1Q60847 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col12a1Q60847 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Col12a1Q60847 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col12a1Q60847 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.41■□□□□ 0.86
Col12a1Q60847 Gm13168-201ENSMUST00000121771 632 ntBASIC20.41■□□□□ 0.86
Col12a1Q60847 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col12a1Q60847 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col12a1Q60847 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Col12a1Q60847 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col12a1Q60847 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Col12a1Q60847 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.4■□□□□ 0.86
Col12a1Q60847 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col12a1Q60847 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.4■□□□□ 0.86
Col12a1Q60847 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col12a1Q60847 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col12a1Q60847 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.39■□□□□ 0.85
Col12a1Q60847 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col12a1Q60847 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col12a1Q60847 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col12a1Q60847 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Col12a1Q60847 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.39■□□□□ 0.85
Col12a1Q60847 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.39■□□□□ 0.85
Col12a1Q60847 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col12a1Q60847 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col12a1Q60847 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Col12a1Q60847 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col12a1Q60847 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col12a1Q60847 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.38■□□□□ 0.85
Col12a1Q60847 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Col12a1Q60847 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col12a1Q60847 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col12a1Q60847 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col12a1Q60847 Gm20049-201ENSMUST00000219950 730 ntBASIC20.38■□□□□ 0.85
Col12a1Q60847 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
Col12a1Q60847 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col12a1Q60847 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col12a1Q60847 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.37■□□□□ 0.85
Col12a1Q60847 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col12a1Q60847 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col12a1Q60847 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col12a1Q60847 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col12a1Q60847 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Col12a1Q60847 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col12a1Q60847 Gm11421-201ENSMUST00000122124 294 ntBASIC20.36■□□□□ 0.85
Col12a1Q60847 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.36■□□□□ 0.85
Col12a1Q60847 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.36■□□□□ 0.85
Col12a1Q60847 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col12a1Q60847 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.36■□□□□ 0.85
Col12a1Q60847 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col12a1Q60847 Gm37856-201ENSMUST00000191634 999 ntBASIC20.36■□□□□ 0.85
Col12a1Q60847 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.36■□□□□ 0.85
Col12a1Q60847 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col12a1Q60847 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col12a1Q60847 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.35■□□□□ 0.85
Col12a1Q60847 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col12a1Q60847 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Col12a1Q60847 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col12a1Q60847 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.35■□□□□ 0.85
Col12a1Q60847 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col12a1Q60847 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col12a1Q60847 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms