Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vmn1r223Q5SSA0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vmn1r223Q5SSA0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vmn1r223Q5SSA0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vmn1r223Q5SSA0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vmn1r223Q5SSA0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vmn1r223Q5SSA0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Iqck-206ENSMUST00000208658 2891 ntBASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vmn1r223Q5SSA0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vmn1r223Q5SSA0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms