Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Gm10493-201ENSMUST00000097270 612 ntBASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-2Q5R1I4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-2Q5R1I4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-2Q5R1I4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-2Q5R1I4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-2Q5R1I4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.83■□□□□ 0.44
Trav6-2Q5R1I4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trav6-2Q5R1I4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-2Q5R1I4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-2Q5R1I4 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.83■□□□□ 0.44
Trav6-2Q5R1I4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-2Q5R1I4 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Smad6-203ENSMUST00000179458 273 ntBASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-2Q5R1I4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-2Q5R1I4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6-2Q5R1I4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav6-2Q5R1I4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Trav6-2Q5R1I4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.77■□□□□ 0.43
Trav6-2Q5R1I4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trav6-2Q5R1I4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6-2Q5R1I4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6-2Q5R1I4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-2Q5R1I4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms